Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC020765.3-201ENST00000613051 740 ntBASIC17.46■□□□□ 0.39
SLC1A1P43005 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.46■□□□□ 0.39
SLC1A1P43005 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC1A1P43005 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC1A1P43005 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC1A1P43005 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SLC1A1P43005 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
SLC1A1P43005 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SLC1A1P43005 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SLC1A1P43005 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.46■□□□□ 0.38
SLC1A1P43005 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A1P43005 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A1P43005 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A1P43005 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A1P43005 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SLC1A1P43005 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SLC1A1P43005 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A1P43005 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SLC1A1P43005 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A1P43005 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.45■□□□□ 0.38
SLC1A1P43005 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A1P43005 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC1A1P43005 AC105339.3-201ENST00000560043 636 ntBASIC17.45■□□□□ 0.38
SLC1A1P43005 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.45■□□□□ 0.38
SLC1A1P43005 AC010654.1-201ENST00000615722 808 ntBASIC17.45■□□□□ 0.38
SLC1A1P43005 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC1A1P43005 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC1A1P43005 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A1P43005 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A1P43005 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A1P43005 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A1P43005 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.44■□□□□ 0.38
SLC1A1P43005 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A1P43005 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A1P43005 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC1A1P43005 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A1P43005 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC1A1P43005 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC1A1P43005 AL356488.2-201ENST00000602755 427 ntBASIC17.44■□□□□ 0.38
SLC1A1P43005 AC012313.10-201ENST00000623509 926 ntBASIC17.44■□□□□ 0.38
SLC1A1P43005 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC1A1P43005 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A1P43005 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC1A1P43005 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC1A1P43005 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SLC1A1P43005 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC1A1P43005 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.44■□□□□ 0.38
SLC1A1P43005 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A1P43005 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC1A1P43005 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC1A1P43005 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 RPS2P28-201ENST00000314255 741 ntBASIC17.43■□□□□ 0.38
SLC1A1P43005 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms