Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC5P40937 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RFC5P40937 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC5P40937 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC5P40937 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC5P40937 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RFC5P40937 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RFC5P40937 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.34■□□□□ 0.53
RFC5P40937 AL645939.2-201ENST00000427340 991 ntBASIC18.34■□□□□ 0.53
RFC5P40937 GPS2P2-201ENST00000430745 888 ntBASIC18.34■□□□□ 0.53
RFC5P40937 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 AC109322.1-201ENST00000524499 1264 ntBASIC18.34■□□□□ 0.53
RFC5P40937 SLC25A39P2-201ENST00000537614 270 ntBASIC18.34■□□□□ 0.53
RFC5P40937 AC025678.2-201ENST00000562061 970 ntBASIC18.34■□□□□ 0.53
RFC5P40937 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.34■□□□□ 0.53
RFC5P40937 AC093028.1-201ENST00000622998 982 ntBASIC18.34■□□□□ 0.53
RFC5P40937 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.34■□□□□ 0.53
RFC5P40937 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RFC5P40937 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.34■□□□□ 0.53
RFC5P40937 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC5P40937 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RFC5P40937 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC5P40937 AL031731.1-201ENST00000642131 2094 ntBASIC18.34■□□□□ 0.53
RFC5P40937 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.33■□□□□ 0.53
RFC5P40937 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFC5P40937 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC5P40937 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC5P40937 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC5P40937 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC5P40937 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC5P40937 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
RFC5P40937 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RFC5P40937 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.33■□□□□ 0.53
RFC5P40937 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC5P40937 GPAA1P2-202ENST00000606848 1787 ntBASIC18.33■□□□□ 0.53
RFC5P40937 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC5P40937 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.33■□□□□ 0.52
RFC5P40937 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC5P40937 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC5P40937 AL512356.2-201ENST00000546955 174 ntBASIC18.33■□□□□ 0.52
RFC5P40937 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RFC5P40937 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC5P40937 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.33■□□□□ 0.52
RFC5P40937 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC5P40937 AP001059.3-201ENST00000619053 235 ntBASIC18.33■□□□□ 0.52
RFC5P40937 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC5P40937 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.33■□□□□ 0.52
RFC5P40937 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC5P40937 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC5P40937 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFC5P40937 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 AC078925.2-201ENST00000624013 1973 ntBASIC18.32■□□□□ 0.52
RFC5P40937 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RFC5P40937 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFC5P40937 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.32■□□□□ 0.52
RFC5P40937 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC5P40937 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms