Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA3P32297 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA3P32297 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA3P32297 AP002414.1-201ENST00000391405 1147 ntBASIC17.61■□□□□ 0.41
CHRNA3P32297 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA3P32297 KRT18P27-201ENST00000427733 1299 ntBASIC17.61■□□□□ 0.41
CHRNA3P32297 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA3P32297 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA3P32297 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA3P32297 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA3P32297 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA3P32297 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA3P32297 AL356488.2-201ENST00000602755 427 ntBASIC17.61■□□□□ 0.41
CHRNA3P32297 AL671883.3-201ENST00000603274 991 ntBASIC17.61■□□□□ 0.41
CHRNA3P32297 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA3P32297 MIR1199-201ENST00000621445 119 ntBASIC17.61■□□□□ 0.41
CHRNA3P32297 AC004706.3-202ENST00000621574 984 ntBASIC17.61■□□□□ 0.41
CHRNA3P32297 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA3P32297 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA3P32297 ZNF259P1-201ENST00000407656 1365 ntBASIC17.61■□□□□ 0.41
CHRNA3P32297 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHRNA3P32297 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA3P32297 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA3P32297 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA3P32297 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CHRNA3P32297 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CHRNA3P32297 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA3P32297 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CHRNA3P32297 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 AC073621.1-201ENST00000392730 636 ntBASIC17.6■□□□□ 0.41
CHRNA3P32297 RNA5SP415-201ENST00000517246 115 ntBASIC17.6■□□□□ 0.41
CHRNA3P32297 AC145285.3-201ENST00000564603 959 ntBASIC17.6■□□□□ 0.41
CHRNA3P32297 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRNA3P32297 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA3P32297 AC104109.2-201ENST00000602919 1418 ntBASIC17.6■□□□□ 0.41
CHRNA3P32297 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA3P32297 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA3P32297 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA3P32297 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRNA3P32297 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRNA3P32297 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHRNA3P32297 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
CHRNA3P32297 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRNA3P32297 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA3P32297 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA3P32297 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 AL365203.3-201ENST00000609742 2057 ntBASIC17.59■□□□□ 0.41
CHRNA3P32297 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.59■□□□□ 0.41
CHRNA3P32297 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms