Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AC108751.1-201ENST00000490852 363 ntBASIC18.63■□□□□ 0.57
CASP1P29466 UNC93B6-202ENST00000528242 690 ntBASIC18.63■□□□□ 0.57
CASP1P29466 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.63■□□□□ 0.57
CASP1P29466 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP1P29466 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP1P29466 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP1P29466 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.63■□□□□ 0.57
CASP1P29466 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP1P29466 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP1P29466 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CASP1P29466 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP1P29466 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP1P29466 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 IGLL3P-201ENST00000412472 434 ntBASIC18.62■□□□□ 0.57
CASP1P29466 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP1P29466 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.62■□□□□ 0.57
CASP1P29466 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CASP1P29466 AC087641.1-201ENST00000557561 1021 ntBASIC18.62■□□□□ 0.57
CASP1P29466 MIR4751-201ENST00000578027 74 ntBASIC18.62■□□□□ 0.57
CASP1P29466 AL121894.2-201ENST00000602977 491 ntBASIC18.62■□□□□ 0.57
CASP1P29466 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP1P29466 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP1P29466 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CASP1P29466 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP1P29466 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.61■□□□□ 0.57
CASP1P29466 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CASP1P29466 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.61■□□□□ 0.57
CASP1P29466 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 GPAA1P2-202ENST00000606848 1787 ntBASIC18.61■□□□□ 0.57
CASP1P29466 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.61■□□□□ 0.57
CASP1P29466 HLA-A-201ENST00000376802 1334 ntBASIC18.61■□□□□ 0.57
CASP1P29466 RPS2P28-201ENST00000314255 741 ntBASIC18.61■□□□□ 0.57
CASP1P29466 FAM185BP-201ENST00000443595 716 ntBASIC18.61■□□□□ 0.57
CASP1P29466 AC009947.1-201ENST00000444350 727 ntBASIC18.61■□□□□ 0.57
CASP1P29466 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.61■□□□□ 0.57
CASP1P29466 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.61■□□□□ 0.57
CASP1P29466 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.61■□□□□ 0.57
CASP1P29466 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CASP1P29466 AC005412.3-201ENST00000580309 715 ntBASIC18.61■□□□□ 0.57
CASP1P29466 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.61■□□□□ 0.57
CASP1P29466 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CASP1P29466 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CASP1P29466 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASP1P29466 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CASP1P29466 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.61■□□□□ 0.57
CASP1P29466 AL513523.2-202ENST00000427283 2040 ntBASIC18.61■□□□□ 0.57
CASP1P29466 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.6■□□□□ 0.57
CASP1P29466 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASP1P29466 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASP1P29466 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CASP1P29466 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
CASP1P29466 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASP1P29466 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASP1P29466 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms