Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.95■□□□□ 0.3
NFKB1P19838 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NFKB1P19838 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.95■□□□□ 0.3
NFKB1P19838 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.95■□□□□ 0.3
NFKB1P19838 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NFKB1P19838 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.95■□□□□ 0.3
NFKB1P19838 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.95■□□□□ 0.3
NFKB1P19838 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.95■□□□□ 0.3
NFKB1P19838 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.95■□□□□ 0.3
NFKB1P19838 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.95■□□□□ 0.3
NFKB1P19838 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.95■□□□□ 0.3
NFKB1P19838 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NFKB1P19838 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
NFKB1P19838 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 DOC2GP-204ENST00000639052 2548 ntBASIC16.94■□□□□ 0.3
NFKB1P19838 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
NFKB1P19838 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.94■□□□□ 0.3
NFKB1P19838 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NFKB1P19838 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.94■□□□□ 0.3
NFKB1P19838 AL590627.1-203ENST00000421194 1026 ntBASIC16.94■□□□□ 0.3
NFKB1P19838 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 AC007967.2-201ENST00000432613 625 ntBASIC16.94■□□□□ 0.3
NFKB1P19838 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.94■□□□□ 0.3
NFKB1P19838 RPL13AP23-201ENST00000480739 586 ntBASIC16.94■□□□□ 0.3
NFKB1P19838 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.94■□□□□ 0.3
NFKB1P19838 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
NFKB1P19838 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NFKB1P19838 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFKB1P19838 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 RNU1-129P-201ENST00000384064 167 ntBASIC16.93■□□□□ 0.3
NFKB1P19838 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.93■□□□□ 0.3
NFKB1P19838 SLC25A1P1-201ENST00000528351 927 ntBASIC16.93■□□□□ 0.3
NFKB1P19838 AC096734.2-201ENST00000562054 433 ntBASIC16.93■□□□□ 0.3
NFKB1P19838 AL031432.2-201ENST00000566714 459 ntBASIC16.93■□□□□ 0.3
NFKB1P19838 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 AL928711.1-201ENST00000570165 459 ntBASIC16.93■□□□□ 0.3
NFKB1P19838 U1.21-201ENST00000580816 167 ntBASIC16.93■□□□□ 0.3
NFKB1P19838 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 AC064836.3-201ENST00000607928 673 ntBASIC16.93■□□□□ 0.3
NFKB1P19838 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NFKB1P19838 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms