Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.29■□□□□ 0.2
CDH1P12830 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CDH1P12830 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH1P12830 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 AC104109.2-201ENST00000602919 1418 ntBASIC16.28■□□□□ 0.2
CDH1P12830 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDH1P12830 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 AC129492.6-201ENST00000611383 1305 ntBASIC16.28■□□□□ 0.2
CDH1P12830 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH1P12830 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 PRSS29P-201ENST00000440800 595 ntBASIC16.28■□□□□ 0.2
CDH1P12830 RPL13AP23-201ENST00000480739 586 ntBASIC16.28■□□□□ 0.2
CDH1P12830 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH1P12830 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDH1P12830 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CDH1P12830 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH1P12830 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH1P12830 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 AL391256.1-201ENST00000443260 1855 ntBASIC16.28■□□□□ 0.2
CDH1P12830 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH1P12830 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH1P12830 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH1P12830 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH1P12830 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDH1P12830 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH1P12830 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CDH1P12830 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH1P12830 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH1P12830 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDH1P12830 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CDH1P12830 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDH1P12830 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH1P12830 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH1P12830 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH1P12830 MPDU1-223ENST00000582151 728 ntBASIC16.27■□□□□ 0.2
CDH1P12830 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH1P12830 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH1P12830 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH1P12830 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH1P12830 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH1P12830 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
CDH1P12830 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.27■□□□□ 0.19
CDH1P12830 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH1P12830 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH1P12830 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH1P12830 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.27■□□□□ 0.19
CDH1P12830 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms