Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 LINC02012-201ENST00000608206 1725 ntBASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 AC008764.6-201ENST00000595909 2069 ntBASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CSB-PGBD3P0DP91 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 AC079776.1-201ENST00000401540 1152 ntBASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 RPS2P32-201ENST00000439199 892 ntBASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 SERBP1P3-201ENST00000459980 809 ntBASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 KRT17P8-201ENST00000540749 863 ntBASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 RAB43P1-201ENST00000561790 589 ntBASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 MIR6805-201ENST00000615055 62 ntBASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSB-PGBD3P0DP91 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CSB-PGBD3P0DP91 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.89■■□□□ 1.1
CSB-PGBD3P0DP91 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CSB-PGBD3P0DP91 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
CSB-PGBD3P0DP91 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 MIR658-201ENST00000385210 100 ntBASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 AC013467.2-201ENST00000605472 835 ntBASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 KRT8P39-201ENST00000396270 1433 ntBASIC21.89■■□□□ 1.09
CSB-PGBD3P0DP91 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 SLC7A15P-201ENST00000424028 1363 ntBASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms