Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.45■□□□□ 0.7
BRD1O95696 BX005266.1-201ENST00000473402 457 ntBASIC19.45■□□□□ 0.7
BRD1O95696 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.45■□□□□ 0.7
BRD1O95696 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.45■□□□□ 0.7
BRD1O95696 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.45■□□□□ 0.7
BRD1O95696 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.45■□□□□ 0.7
BRD1O95696 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.45■□□□□ 0.7
BRD1O95696 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.45■□□□□ 0.7
BRD1O95696 REXO1L3P-201ENST00000622202 1288 ntBASIC19.45■□□□□ 0.7
BRD1O95696 AC117500.6-201ENST00000624871 588 ntBASIC19.45■□□□□ 0.7
BRD1O95696 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.45■□□□□ 0.7
BRD1O95696 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
BRD1O95696 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.45■□□□□ 0.7
BRD1O95696 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRD1O95696 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
BRD1O95696 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BRD1O95696 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BRD1O95696 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BRD1O95696 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BRD1O95696 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.44■□□□□ 0.7
BRD1O95696 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.44■□□□□ 0.7
BRD1O95696 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.44■□□□□ 0.7
BRD1O95696 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BRD1O95696 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.44■□□□□ 0.7
BRD1O95696 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.44■□□□□ 0.7
BRD1O95696 KRT18P13-201ENST00000400056 1290 ntBASIC19.44■□□□□ 0.7
BRD1O95696 NUS1P2-201ENST00000417358 873 ntBASIC19.44■□□□□ 0.7
BRD1O95696 AL590627.1-203ENST00000421194 1026 ntBASIC19.44■□□□□ 0.7
BRD1O95696 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.44■□□□□ 0.7
BRD1O95696 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.44■□□□□ 0.7
BRD1O95696 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.44■□□□□ 0.7
BRD1O95696 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.44■□□□□ 0.7
BRD1O95696 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BRD1O95696 AP001269.4-201ENST00000609611 512 ntBASIC19.44■□□□□ 0.7
BRD1O95696 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.44■□□□□ 0.7
BRD1O95696 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.44■□□□□ 0.7
BRD1O95696 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.44■□□□□ 0.7
BRD1O95696 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.44■□□□□ 0.7
BRD1O95696 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.44■□□□□ 0.7
BRD1O95696 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRD1O95696 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
BRD1O95696 REXO1L8P-201ENST00000604378 1897 ntBASIC19.43■□□□□ 0.7
BRD1O95696 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.43■□□□□ 0.7
BRD1O95696 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRD1O95696 NCF1C-201ENST00000438382 1427 ntBASIC19.43■□□□□ 0.7
BRD1O95696 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRD1O95696 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
BRD1O95696 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
BRD1O95696 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.43■□□□□ 0.7
BRD1O95696 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.43■□□□□ 0.7
BRD1O95696 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRD1O95696 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.43■□□□□ 0.7
BRD1O95696 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BRD1O95696 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRD1O95696 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.43■□□□□ 0.7
BRD1O95696 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRD1O95696 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.43■□□□□ 0.7
BRD1O95696 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.43■□□□□ 0.7
BRD1O95696 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRD1O95696 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.43■□□□□ 0.7
BRD1O95696 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BRD1O95696 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BRD1O95696 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRD1O95696 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.43■□□□□ 0.7
BRD1O95696 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.43■□□□□ 0.7
BRD1O95696 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.43■□□□□ 0.7
BRD1O95696 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.43■□□□□ 0.7
BRD1O95696 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRD1O95696 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms