Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
PMPCBO75439 AC005052.1-201ENST00000625181 2492 ntBASIC16.95■□□□□ 0.3
PMPCBO75439 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMPCBO75439 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMPCBO75439 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PMPCBO75439 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMPCBO75439 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMPCBO75439 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PMPCBO75439 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.95■□□□□ 0.3
PMPCBO75439 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
PMPCBO75439 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.94■□□□□ 0.3
PMPCBO75439 MIR4515-201ENST00000584082 81 ntBASIC16.94■□□□□ 0.3
PMPCBO75439 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PMPCBO75439 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.94■□□□□ 0.3
PMPCBO75439 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
PMPCBO75439 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.94■□□□□ 0.3
PMPCBO75439 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PMPCBO75439 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PMPCBO75439 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
PMPCBO75439 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 AC092364.2-201ENST00000596710 2692 ntBASIC16.93■□□□□ 0.3
PMPCBO75439 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
PMPCBO75439 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PMPCBO75439 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 AC018845.2-201ENST00000568326 409 ntBASIC16.93■□□□□ 0.3
PMPCBO75439 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.93■□□□□ 0.3
PMPCBO75439 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
PMPCBO75439 AC064836.3-201ENST00000607928 673 ntBASIC16.93■□□□□ 0.3
PMPCBO75439 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.93■□□□□ 0.3
PMPCBO75439 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PMPCBO75439 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.93■□□□□ 0.3
PMPCBO75439 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMPCBO75439 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMPCBO75439 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMPCBO75439 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.92■□□□□ 0.3
PMPCBO75439 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMPCBO75439 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PMPCBO75439 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMPCBO75439 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMPCBO75439 ZNF259P1-201ENST00000407656 1365 ntBASIC16.92■□□□□ 0.3
PMPCBO75439 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.92■□□□□ 0.3
PMPCBO75439 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMPCBO75439 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms