Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.84■□□□□ 0.13
SCN2BO60939 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.84■□□□□ 0.13
SCN2BO60939 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.84■□□□□ 0.13
SCN2BO60939 AL805961.1-202ENST00000641562 540 ntBASIC15.84■□□□□ 0.13
SCN2BO60939 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SCN2BO60939 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.84■□□□□ 0.13
SCN2BO60939 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SCN2BO60939 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SCN2BO60939 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCN2BO60939 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SCN2BO60939 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCN2BO60939 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.84■□□□□ 0.13
SCN2BO60939 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCN2BO60939 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SCN2BO60939 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCN2BO60939 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SCN2BO60939 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.83■□□□□ 0.13
SCN2BO60939 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SCN2BO60939 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCN2BO60939 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SCN2BO60939 AL162727.3-201ENST00000635661 2787 ntBASIC15.83■□□□□ 0.13
SCN2BO60939 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCN2BO60939 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.83■□□□□ 0.13
SCN2BO60939 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.83■□□□□ 0.13
SCN2BO60939 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCN2BO60939 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCN2BO60939 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SCN2BO60939 PI4KAP1-204ENST00000612579 1703 ntBASIC15.83■□□□□ 0.13
SCN2BO60939 AC131009.4-201ENST00000624048 1740 ntBASIC15.83■□□□□ 0.13
SCN2BO60939 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN2BO60939 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN2BO60939 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.83■□□□□ 0.12
SCN2BO60939 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.83■□□□□ 0.12
SCN2BO60939 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.83■□□□□ 0.12
SCN2BO60939 ELK2BP-201ENST00000415014 1224 ntBASIC15.83■□□□□ 0.12
SCN2BO60939 PMS2P1-201ENST00000431037 1228 ntBASIC15.83■□□□□ 0.12
SCN2BO60939 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.83■□□□□ 0.12
SCN2BO60939 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.83■□□□□ 0.12
SCN2BO60939 AC107918.2-201ENST00000530817 355 ntBASIC15.83■□□□□ 0.12
SCN2BO60939 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.83■□□□□ 0.12
SCN2BO60939 AC091304.2-201ENST00000564639 760 ntBASIC15.83■□□□□ 0.12
SCN2BO60939 AC091167.2-201ENST00000579581 588 ntBASIC15.83■□□□□ 0.12
SCN2BO60939 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SCN2BO60939 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SCN2BO60939 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.83■□□□□ 0.12
SCN2BO60939 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN2BO60939 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN2BO60939 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCN2BO60939 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SCN2BO60939 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN2BO60939 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN2BO60939 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCN2BO60939 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SCN2BO60939 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.82■□□□□ 0.12
SCN2BO60939 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN2BO60939 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
SCN2BO60939 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN2BO60939 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN2BO60939 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.82■□□□□ 0.12
SCN2BO60939 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.82■□□□□ 0.12
SCN2BO60939 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 KRT18P27-201ENST00000427733 1299 ntBASIC15.82■□□□□ 0.12
SCN2BO60939 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SCN2BO60939 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.82■□□□□ 0.12
SCN2BO60939 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
SCN2BO60939 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SCN2BO60939 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.82■□□□□ 0.12
SCN2BO60939 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN2BO60939 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms