Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.96□□□□□ -0.01
ZIC3O60481 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
ZIC3O60481 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
ZIC3O60481 MIR346-201ENST00000362234 95 ntBASIC14.96□□□□□ -0.01
ZIC3O60481 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 FAM58DP-201ENST00000428076 619 ntBASIC14.96□□□□□ -0.01
ZIC3O60481 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.96□□□□□ -0.01
ZIC3O60481 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.96□□□□□ -0.01
ZIC3O60481 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.96□□□□□ -0.01
ZIC3O60481 IGHV3-62-201ENST00000520057 340 ntBASIC14.96□□□□□ -0.01
ZIC3O60481 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.96□□□□□ -0.01
ZIC3O60481 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.96□□□□□ -0.01
ZIC3O60481 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ZIC3O60481 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
ZIC3O60481 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC3O60481 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ZIC3O60481 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZIC3O60481 AC092171.3-201ENST00000610122 2651 ntBASIC14.96□□□□□ -0.02
ZIC3O60481 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZIC3O60481 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.96□□□□□ -0.02
ZIC3O60481 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZIC3O60481 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZIC3O60481 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.96□□□□□ -0.02
ZIC3O60481 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.95□□□□□ -0.02
ZIC3O60481 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
ZIC3O60481 NKILA-202ENST00000614771 2598 ntBASIC14.95□□□□□ -0.02
ZIC3O60481 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
ZIC3O60481 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.95□□□□□ -0.02
ZIC3O60481 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.95□□□□□ -0.02
ZIC3O60481 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.95□□□□□ -0.02
ZIC3O60481 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.95□□□□□ -0.02
ZIC3O60481 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.95□□□□□ -0.02
ZIC3O60481 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.95□□□□□ -0.02
ZIC3O60481 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.95□□□□□ -0.02
ZIC3O60481 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
ZIC3O60481 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.95□□□□□ -0.02
ZIC3O60481 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.95□□□□□ -0.02
ZIC3O60481 GGT3P-204ENST00000453783 1664 ntBASIC14.95□□□□□ -0.02
ZIC3O60481 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.95□□□□□ -0.02
ZIC3O60481 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.95□□□□□ -0.02
ZIC3O60481 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC3O60481 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
ZIC3O60481 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.94□□□□□ -0.02
ZIC3O60481 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.94□□□□□ -0.02
ZIC3O60481 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ZIC3O60481 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ZIC3O60481 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
ZIC3O60481 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 AC073439.1-201ENST00000624121 1774 ntBASIC14.94□□□□□ -0.02
ZIC3O60481 UXT-AS1-201ENST00000590504 1525 ntBASIC14.94□□□□□ -0.02
ZIC3O60481 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 AL139400.1-201ENST00000366220 510 ntBASIC14.94□□□□□ -0.02
ZIC3O60481 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms