Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
FOXN3O00409 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXN3O00409 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXN3O00409 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
FOXN3O00409 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
FOXN3O00409 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
FOXN3O00409 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXN3O00409 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
FOXN3O00409 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
FOXN3O00409 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXN3O00409 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.84■□□□□ 0.45
FOXN3O00409 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
FOXN3O00409 HCG4B-203ENST00000450128 991 ntBASIC17.84■□□□□ 0.45
FOXN3O00409 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
FOXN3O00409 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.84■□□□□ 0.45
FOXN3O00409 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXN3O00409 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXN3O00409 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXN3O00409 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
FOXN3O00409 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXN3O00409 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FOXN3O00409 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
FOXN3O00409 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 PCGF3-213ENST00000620529 1899 ntBASIC17.84■□□□□ 0.45
FOXN3O00409 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
FOXN3O00409 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXN3O00409 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN3O00409 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN3O00409 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXN3O00409 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN3O00409 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN3O00409 AC008741.2-201ENST00000612792 3115 ntBASIC17.83■□□□□ 0.45
FOXN3O00409 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
FOXN3O00409 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN3O00409 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN3O00409 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN3O00409 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN3O00409 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN3O00409 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.83■□□□□ 0.44
FOXN3O00409 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
FOXN3O00409 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.83■□□□□ 0.44
FOXN3O00409 AL513480.1-201ENST00000451731 511 ntBASIC17.83■□□□□ 0.44
FOXN3O00409 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXN3O00409 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXN3O00409 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXN3O00409 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXN3O00409 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.83■□□□□ 0.44
FOXN3O00409 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
FOXN3O00409 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXN3O00409 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.83■□□□□ 0.44
FOXN3O00409 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXN3O00409 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
FOXN3O00409 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN3O00409 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
FOXN3O00409 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
FOXN3O00409 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
FOXN3O00409 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
FOXN3O00409 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXN3O00409 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN3O00409 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
FOXN3O00409 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms