Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 MIR1238-201ENST00000408483 83 ntBASIC11.76□□□□□ -0.53
LINC01546A6NGU7 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.76□□□□□ -0.53
LINC01546A6NGU7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 AL590326.2-201ENST00000625139 305 ntBASIC11.76□□□□□ -0.53
LINC01546A6NGU7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 HBZP1-201ENST00000354915 429 ntBASIC11.75□□□□□ -0.53
LINC01546A6NGU7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 AC073592.5-201ENST00000624854 528 ntBASIC11.75□□□□□ -0.53
LINC01546A6NGU7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01546A6NGU7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms