Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PCDH8P1-201ENST00000428983 2773 ntBASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PI4KAP1-204ENST00000612579 1703 ntBASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AL135999.2-201ENST00000622438 1686 ntBASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AP002414.1-201ENST00000391405 1147 ntBASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RPSAP43-201ENST00000402237 625 ntBASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC010654.1-201ENST00000615722 808 ntBASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC092171.3-201ENST00000610122 2651 ntBASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.45□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FRMD8P1-201ENST00000440433 1524 ntBASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC008894.3-201ENST00000624324 3103 ntBASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KRT18P2-201ENST00000447938 1258 ntBASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms