Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AC099063.4-201ENST00000641099 1602 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AL513523.2-202ENST00000427283 2040 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AC005915.1-201ENST00000624912 2018 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 PTCHD3P3-201ENST00000403073 906 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 PAWRP1-201ENST00000451083 565 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AP002469.2-201ENST00000531724 424 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AC105339.3-201ENST00000560043 636 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 AL773604.1-201ENST00000617417 272 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 PGM5P2-202ENST00000637225 1043 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 PI4KAP1-204ENST00000612579 1703 ntBASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DRB4X5D2U9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms