Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 AC091812.2-201ENST00000619081 385 ntBASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 AC093028.1-201ENST00000622998 982 ntBASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 AP002490.2-201ENST00000524791 560 ntBASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 AC107918.2-201ENST00000530817 355 ntBASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 AC027612.4-201ENST00000605371 583 ntBASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 AC068137.2-201ENST00000605408 478 ntBASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB11Q9Y5F2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB11Q9Y5F2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PCDHB11Q9Y5F2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB11Q9Y5F2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
PCDHB11Q9Y5F2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms