Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 IGHGP-201ENST00000390555 1178 ntBASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 AC098590.1-201ENST00000468126 897 ntBASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 HLA-J-202ENST00000469281 1241 ntBASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 GCSHP2-201ENST00000560971 527 ntBASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 AC079602.3-201ENST00000623931 403 ntBASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 ECEL1P3-201ENST00000427961 737 ntBASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 AP003733.1-201ENST00000491725 852 ntBASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 AL135999.2-201ENST00000622438 1686 ntBASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.28■□□□□ 0.04
ERGIC3Q9Y282 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
ERGIC3Q9Y282 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms