Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF6Q9Y252 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF6Q9Y252 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RNF6Q9Y252 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RNF6Q9Y252 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF6Q9Y252 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF6Q9Y252 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF6Q9Y252 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF6Q9Y252 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF6Q9Y252 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF6Q9Y252 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF6Q9Y252 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF6Q9Y252 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.78■□□□□ 0.12
RNF6Q9Y252 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 AC007967.3-201ENST00000434308 558 ntBASIC15.78■□□□□ 0.12
RNF6Q9Y252 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 AC105339.3-201ENST00000560043 636 ntBASIC15.78■□□□□ 0.12
RNF6Q9Y252 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 AP000867.4-201ENST00000641616 219 ntBASIC15.78■□□□□ 0.12
RNF6Q9Y252 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF6Q9Y252 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF6Q9Y252 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 AC105917.1-201ENST00000506637 2539 ntBASIC15.77■□□□□ 0.12
RNF6Q9Y252 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 KRT18P3-201ENST00000451602 1288 ntBASIC15.77■□□□□ 0.12
RNF6Q9Y252 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF6Q9Y252 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
RNF6Q9Y252 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF6Q9Y252 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms