Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SPDYE10P-202ENST00000612005 668 ntBASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 SPDYE8P-202ENST00000612377 668 ntBASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 AC055876.3-201ENST00000431496 288 ntBASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 AC005237.2-201ENST00000434368 219 ntBASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 AC087641.1-201ENST00000557561 1021 ntBASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 AC138649.4-201ENST00000612222 287 ntBASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 AP001059.3-201ENST00000619053 235 ntBASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN3Q9UPQ7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 DUX4L27-201ENST00000554796 1261 ntBASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN3Q9UPQ7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.46■■□□□ 1.03
PDZRN3Q9UPQ7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms