Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 AC092053.1-201ENST00000605787 1936 ntBASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA1Q9UND3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AC124947.2-201ENST00000547118 1133 ntBASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AC022145.2-201ENST00000598203 171 ntBASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA1Q9UND3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 AL671277.1-201ENST00000429656 993 ntBASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 AL645728.2-201ENST00000641974 660 ntBASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms