Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 AC010491.1-201ENST00000563101 2797 ntBASIC16.23■□□□□ 0.19
NDE1Q9NXR1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.23■□□□□ 0.19
NDE1Q9NXR1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 AC010947.1-201ENST00000623454 693 ntBASIC16.22■□□□□ 0.19
NDE1Q9NXR1 AC073912.3-201ENST00000624414 853 ntBASIC16.22■□□□□ 0.19
NDE1Q9NXR1 AL031432.5-201ENST00000641059 760 ntBASIC16.22■□□□□ 0.19
NDE1Q9NXR1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 AL009178.2-201ENST00000597278 2719 ntBASIC16.22■□□□□ 0.19
NDE1Q9NXR1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDE1Q9NXR1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 MIR662-201ENST00000384847 95 ntBASIC16.21■□□□□ 0.19
NDE1Q9NXR1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 GCSHP5-201ENST00000443090 522 ntBASIC16.21■□□□□ 0.19
NDE1Q9NXR1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 AC140113.3-201ENST00000605663 199 ntBASIC16.21■□□□□ 0.19
NDE1Q9NXR1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 CYP2D8P-201ENST00000433633 1490 ntBASIC16.21■□□□□ 0.19
NDE1Q9NXR1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.21■□□□□ 0.19
NDE1Q9NXR1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDE1Q9NXR1 KRT17P2-201ENST00000300992 1314 ntBASIC16.2■□□□□ 0.18
NDE1Q9NXR1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms