Protein–RNA interactions for Protein: Q9NS71

GKN1, Gastrokine-1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1Q9NS71 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 AL390754.1-201ENST00000619088 582 ntBASIC17.25■□□□□ 0.35
GKN1Q9NS71 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 KRT18P34-201ENST00000488218 1270 ntBASIC17.24■□□□□ 0.35
GKN1Q9NS71 MIR4453-201ENST00000584019 89 ntBASIC17.24■□□□□ 0.35
GKN1Q9NS71 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 AC005915.1-201ENST00000624912 2018 ntBASIC17.24■□□□□ 0.35
GKN1Q9NS71 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GKN1Q9NS71 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
GKN1Q9NS71 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 AC236430.1-201ENST00000402231 743 ntBASIC17.23■□□□□ 0.35
GKN1Q9NS71 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.23■□□□□ 0.35
GKN1Q9NS71 UGT1A2P-201ENST00000454886 866 ntBASIC17.23■□□□□ 0.35
GKN1Q9NS71 AL512638.1-201ENST00000457493 794 ntBASIC17.23■□□□□ 0.35
GKN1Q9NS71 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 AC097493.3-201ENST00000509725 367 ntBASIC17.23■□□□□ 0.35
GKN1Q9NS71 AC069120.2-201ENST00000524091 540 ntBASIC17.23■□□□□ 0.35
GKN1Q9NS71 RN7SL204P-201ENST00000582831 262 ntBASIC17.23■□□□□ 0.35
GKN1Q9NS71 AC239800.4-201ENST00000603712 296 ntBASIC17.23■□□□□ 0.35
GKN1Q9NS71 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GKN1Q9NS71 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.23■□□□□ 0.35
GKN1Q9NS71 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms