Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL356309.3-201ENST00000624132 1934 ntBASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL031731.1-201ENST00000642131 2094 ntBASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 AF228730.7-201ENST00000641842 219 ntBASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 GGT4P-201ENST00000623672 1708 ntBASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SHANK2-AS3Q9BTD1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC087163.2-201ENST00000457299 853 ntBASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms