Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 AC073439.1-201ENST00000624121 1774 ntBASIC17.43■□□□□ 0.38
SMOQ99835 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 FOXO1B-201ENST00000504678 1527 ntBASIC17.43■□□□□ 0.38
SMOQ99835 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 GGT3P-204ENST00000453783 1664 ntBASIC17.43■□□□□ 0.38
SMOQ99835 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SMOQ99835 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 KRT18P32-201ENST00000424695 1287 ntBASIC17.43■□□□□ 0.38
SMOQ99835 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 HLA-J-203ENST00000494367 1087 ntBASIC17.43■□□□□ 0.38
SMOQ99835 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 AC109322.1-201ENST00000524499 1264 ntBASIC17.43■□□□□ 0.38
SMOQ99835 SLC25A39P2-201ENST00000537614 270 ntBASIC17.43■□□□□ 0.38
SMOQ99835 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.43■□□□□ 0.38
SMOQ99835 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.43■□□□□ 0.38
SMOQ99835 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.43■□□□□ 0.38
SMOQ99835 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.43■□□□□ 0.38
SMOQ99835 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SMOQ99835 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMOQ99835 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SMOQ99835 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SMOQ99835 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SMOQ99835 NKILA-202ENST00000614771 2598 ntBASIC17.42■□□□□ 0.38
SMOQ99835 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
SMOQ99835 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.42■□□□□ 0.38
SMOQ99835 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.42■□□□□ 0.38
SMOQ99835 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.42■□□□□ 0.38
SMOQ99835 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.42■□□□□ 0.38
SMOQ99835 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.42■□□□□ 0.38
SMOQ99835 PMS2P2-201ENST00000425039 1128 ntBASIC17.42■□□□□ 0.38
SMOQ99835 AC142381.1-201ENST00000426099 345 ntBASIC17.42■□□□□ 0.38
SMOQ99835 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.42■□□□□ 0.38
SMOQ99835 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.42■□□□□ 0.38
SMOQ99835 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.42■□□□□ 0.38
SMOQ99835 PRYP6-201ENST00000514804 343 ntBASIC17.42■□□□□ 0.38
SMOQ99835 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.42■□□□□ 0.38
SMOQ99835 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.42■□□□□ 0.38
SMOQ99835 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.42■□□□□ 0.38
SMOQ99835 AC020765.3-201ENST00000613051 740 ntBASIC17.42■□□□□ 0.38
SMOQ99835 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.42■□□□□ 0.38
SMOQ99835 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.42■□□□□ 0.38
SMOQ99835 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.42■□□□□ 0.38
SMOQ99835 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SMOQ99835 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.42■□□□□ 0.38
SMOQ99835 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.42■□□□□ 0.38
SMOQ99835 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMOQ99835 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.42■□□□□ 0.38
SMOQ99835 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
SMOQ99835 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.41■□□□□ 0.38
SMOQ99835 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.41■□□□□ 0.38
SMOQ99835 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.41■□□□□ 0.38
SMOQ99835 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.41■□□□□ 0.38
SMOQ99835 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SMOQ99835 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.41■□□□□ 0.38
SMOQ99835 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMOQ99835 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMOQ99835 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.41■□□□□ 0.38
SMOQ99835 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms