Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SORT1Q99523 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SORT1Q99523 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.28■□□□□ 0.2
SORT1Q99523 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SORT1Q99523 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SORT1Q99523 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SORT1Q99523 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SORT1Q99523 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.28■□□□□ 0.2
SORT1Q99523 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.28■□□□□ 0.2
SORT1Q99523 AC010654.1-201ENST00000615722 808 ntBASIC16.28■□□□□ 0.2
SORT1Q99523 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.28■□□□□ 0.2
SORT1Q99523 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SORT1Q99523 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
SORT1Q99523 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.28■□□□□ 0.2
SORT1Q99523 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 LINC01144-201ENST00000626198 1710 ntBASIC16.28■□□□□ 0.2
SORT1Q99523 AP005117.1-201ENST00000584346 1413 ntBASIC16.28■□□□□ 0.2
SORT1Q99523 CROCCP1-201ENST00000426910 5675 ntBASIC16.28■□□□□ 0.2
SORT1Q99523 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SORT1Q99523 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SORT1Q99523 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SORT1Q99523 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.27■□□□□ 0.2
SORT1Q99523 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
SORT1Q99523 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SORT1Q99523 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SORT1Q99523 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.27■□□□□ 0.2
SORT1Q99523 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.27■□□□□ 0.2
SORT1Q99523 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.27■□□□□ 0.2
SORT1Q99523 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.27■□□□□ 0.2
SORT1Q99523 AP001269.4-201ENST00000609611 512 ntBASIC16.27■□□□□ 0.2
SORT1Q99523 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.27■□□□□ 0.2
SORT1Q99523 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
SORT1Q99523 AC069224.1-201ENST00000566372 1715 ntBASIC16.27■□□□□ 0.19
SORT1Q99523 AC131009.4-201ENST00000624048 1740 ntBASIC16.27■□□□□ 0.19
SORT1Q99523 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SORT1Q99523 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SORT1Q99523 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SORT1Q99523 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.27■□□□□ 0.19
SORT1Q99523 SLC22A20-204ENST00000530038 1673 ntBASIC16.27■□□□□ 0.19
SORT1Q99523 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SORT1Q99523 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
SORT1Q99523 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SORT1Q99523 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SORT1Q99523 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.26■□□□□ 0.19
SORT1Q99523 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SORT1Q99523 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.26■□□□□ 0.19
SORT1Q99523 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.26■□□□□ 0.19
SORT1Q99523 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.26■□□□□ 0.19
SORT1Q99523 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.26■□□□□ 0.19
SORT1Q99523 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.26■□□□□ 0.19
SORT1Q99523 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.26■□□□□ 0.19
SORT1Q99523 AC087163.2-201ENST00000457299 853 ntBASIC16.26■□□□□ 0.19
SORT1Q99523 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.26■□□□□ 0.19
SORT1Q99523 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.26■□□□□ 0.19
SORT1Q99523 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SORT1Q99523 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.26■□□□□ 0.19
SORT1Q99523 AL139424.1-201ENST00000607572 797 ntBASIC16.26■□□□□ 0.19
SORT1Q99523 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.26■□□□□ 0.19
SORT1Q99523 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SORT1Q99523 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SORT1Q99523 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.26■□□□□ 0.19
SORT1Q99523 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.26■□□□□ 0.19
SORT1Q99523 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SORT1Q99523 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.26■□□□□ 0.19
SORT1Q99523 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SORT1Q99523 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms