Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.28■□□□□ 0.04
SNX18Q96RF0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.28■□□□□ 0.04
SNX18Q96RF0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SNX18Q96RF0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX18Q96RF0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX18Q96RF0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 KRT18P31-201ENST00000506277 1292 ntBASIC15.27■□□□□ 0.04
SNX18Q96RF0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SNX18Q96RF0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 AC148477.5-201ENST00000625164 1645 ntBASIC15.27■□□□□ 0.03
SNX18Q96RF0 AC079776.2-201ENST00000641154 1609 ntBASIC15.27■□□□□ 0.03
SNX18Q96RF0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.27■□□□□ 0.03
SNX18Q96RF0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNX18Q96RF0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 AC144831.1-201ENST00000573312 2656 ntBASIC15.26■□□□□ 0.03
SNX18Q96RF0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 AP002414.1-201ENST00000391405 1147 ntBASIC15.26■□□□□ 0.03
SNX18Q96RF0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms