Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 AL627223.1-201ENST00000416693 442 ntBASIC18.07■□□□□ 0.48
ACAP3Q96P50 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 SPCS2P4-201ENST00000436160 681 ntBASIC18.07■□□□□ 0.48
ACAP3Q96P50 METTL21AP1-201ENST00000438852 635 ntBASIC18.07■□□□□ 0.48
ACAP3Q96P50 KRT18P34-201ENST00000488218 1270 ntBASIC18.07■□□□□ 0.48
ACAP3Q96P50 IGHV3-62-201ENST00000520057 340 ntBASIC18.07■□□□□ 0.48
ACAP3Q96P50 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACAP3Q96P50 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.07■□□□□ 0.48
ACAP3Q96P50 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.06■□□□□ 0.48
ACAP3Q96P50 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 PMS2P2-201ENST00000425039 1128 ntBASIC18.06■□□□□ 0.48
ACAP3Q96P50 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 AC023141.5-201ENST00000458585 616 ntBASIC18.06■□□□□ 0.48
ACAP3Q96P50 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 AC093520.2-201ENST00000561830 333 ntBASIC18.06■□□□□ 0.48
ACAP3Q96P50 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACAP3Q96P50 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.06■□□□□ 0.48
ACAP3Q96P50 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 AC084018.2-201ENST00000613093 2607 ntBASIC18.05■□□□□ 0.48
ACAP3Q96P50 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 TSEN15P1-201ENST00000423257 515 ntBASIC18.05■□□□□ 0.48
ACAP3Q96P50 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 KRT8P23-201ENST00000560090 1207 ntBASIC18.05■□□□□ 0.48
ACAP3Q96P50 LINC01225-203ENST00000563550 1244 ntBASIC18.05■□□□□ 0.48
ACAP3Q96P50 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.05■□□□□ 0.48
ACAP3Q96P50 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACAP3Q96P50 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms