Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.96■□□□□ 0.15
ITCHQ96J02 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.96■□□□□ 0.15
ITCHQ96J02 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.96■□□□□ 0.15
ITCHQ96J02 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.96■□□□□ 0.15
ITCHQ96J02 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.96■□□□□ 0.15
ITCHQ96J02 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ITCHQ96J02 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
ITCHQ96J02 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ITCHQ96J02 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
ITCHQ96J02 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.96■□□□□ 0.14
ITCHQ96J02 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.96■□□□□ 0.14
ITCHQ96J02 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 AC005052.1-201ENST00000625181 2492 ntBASIC15.95■□□□□ 0.14
ITCHQ96J02 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.95■□□□□ 0.14
ITCHQ96J02 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.95■□□□□ 0.14
ITCHQ96J02 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ITCHQ96J02 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.95■□□□□ 0.14
ITCHQ96J02 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.95■□□□□ 0.14
ITCHQ96J02 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 KRT16P4-201ENST00000453883 522 ntBASIC15.95■□□□□ 0.14
ITCHQ96J02 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.95■□□□□ 0.14
ITCHQ96J02 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ITCHQ96J02 AL590326.2-201ENST00000625139 305 ntBASIC15.95■□□□□ 0.14
ITCHQ96J02 AP000550.4-202ENST00000639755 178 ntBASIC15.95■□□□□ 0.14
ITCHQ96J02 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.95■□□□□ 0.14
ITCHQ96J02 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
ITCHQ96J02 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ITCHQ96J02 GGT3P-204ENST00000453783 1664 ntBASIC15.95■□□□□ 0.14
ITCHQ96J02 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.95■□□□□ 0.14
ITCHQ96J02 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.95■□□□□ 0.14
ITCHQ96J02 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
ITCHQ96J02 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ITCHQ96J02 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.94■□□□□ 0.14
ITCHQ96J02 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
ITCHQ96J02 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 AC103702.1-201ENST00000548801 2630 ntBASIC15.94■□□□□ 0.14
ITCHQ96J02 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ITCHQ96J02 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.94■□□□□ 0.14
ITCHQ96J02 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.94■□□□□ 0.14
ITCHQ96J02 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 BX005266.1-201ENST00000473402 457 ntBASIC15.94■□□□□ 0.14
ITCHQ96J02 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.94■□□□□ 0.14
ITCHQ96J02 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.94■□□□□ 0.14
ITCHQ96J02 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ITCHQ96J02 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.94■□□□□ 0.14
ITCHQ96J02 AC069148.1-201ENST00000608741 768 ntBASIC15.94■□□□□ 0.14
ITCHQ96J02 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
ITCHQ96J02 NPAP1P7-201ENST00000613027 823 ntBASIC15.94■□□□□ 0.14
ITCHQ96J02 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ITCHQ96J02 AL022326.1-202ENST00000641533 845 ntBASIC15.94■□□□□ 0.14
ITCHQ96J02 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.94■□□□□ 0.14
ITCHQ96J02 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.94■□□□□ 0.14
ITCHQ96J02 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ITCHQ96J02 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.94■□□□□ 0.14
ITCHQ96J02 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ITCHQ96J02 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.93■□□□□ 0.14
ITCHQ96J02 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ITCHQ96J02 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.93■□□□□ 0.14
ITCHQ96J02 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ITCHQ96J02 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ITCHQ96J02 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ITCHQ96J02 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms