Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 AP002414.1-201ENST00000391405 1147 ntBASIC17.25■□□□□ 0.35
IFT43Q96FT9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 AC108751.1-201ENST00000490852 363 ntBASIC17.25■□□□□ 0.35
IFT43Q96FT9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 AC002347.1-201ENST00000569543 541 ntBASIC17.25■□□□□ 0.35
IFT43Q96FT9 MIR3687-2-201ENST00000577708 61 ntBASIC17.25■□□□□ 0.35
IFT43Q96FT9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 MIR3687-1-201ENST00000614492 61 ntBASIC17.25■□□□□ 0.35
IFT43Q96FT9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFT43Q96FT9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 AL021920.2-201ENST00000624828 1351 ntBASIC17.25■□□□□ 0.35
IFT43Q96FT9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT43Q96FT9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 YBX2P1-201ENST00000394192 760 ntBASIC17.24■□□□□ 0.35
IFT43Q96FT9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.24■□□□□ 0.35
IFT43Q96FT9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 AL805961.1-202ENST00000641562 540 ntBASIC17.24■□□□□ 0.35
IFT43Q96FT9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 AC005915.1-201ENST00000624912 2018 ntBASIC17.24■□□□□ 0.35
IFT43Q96FT9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT43Q96FT9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT43Q96FT9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 TUBB8P12-201ENST00000308911 1335 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms