Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 FLJ16779-201ENST00000612722 7638 ntBASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 AP000867.4-201ENST00000641616 219 ntBASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 MTHFR-217ENST00000641820 1569 ntBASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTN4IP1Q8WWV3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 AC103702.1-201ENST00000548801 2630 ntBASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 ME2P1-201ENST00000426028 1970 ntBASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 AC024909.3-201ENST00000611513 2257 ntBASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RTN4IP1Q8WWV3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RTN4IP1Q8WWV3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RTN4IP1Q8WWV3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.09□□□□□ -0.15
RTN4IP1Q8WWV3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms