Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINS1Q8NG48 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINS1Q8NG48 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LINS1Q8NG48 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.77■□□□□ 0.91
LINS1Q8NG48 TUBB3P1-201ENST00000405796 1332 ntBASIC20.77■□□□□ 0.91
LINS1Q8NG48 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LINS1Q8NG48 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LINS1Q8NG48 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LINS1Q8NG48 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
LINS1Q8NG48 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.76■□□□□ 0.91
LINS1Q8NG48 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 FAM220BP-201ENST00000377689 816 ntBASIC20.76■□□□□ 0.91
LINS1Q8NG48 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
LINS1Q8NG48 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINS1Q8NG48 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.75■□□□□ 0.91
LINS1Q8NG48 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINS1Q8NG48 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LINS1Q8NG48 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LINS1Q8NG48 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 HLA-H-201ENST00000383620 1096 ntBASIC20.74■□□□□ 0.91
LINS1Q8NG48 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LINS1Q8NG48 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 KLF2P3-201ENST00000451977 1087 ntBASIC20.74■□□□□ 0.91
LINS1Q8NG48 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.74■□□□□ 0.91
LINS1Q8NG48 DUX4L27-201ENST00000554796 1261 ntBASIC20.74■□□□□ 0.91
LINS1Q8NG48 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 MIR6080-201ENST00000617359 66 ntBASIC20.74■□□□□ 0.91
LINS1Q8NG48 PCGF3-213ENST00000620529 1899 ntBASIC20.74■□□□□ 0.91
LINS1Q8NG48 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.74■□□□□ 0.91
LINS1Q8NG48 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINS1Q8NG48 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.73■□□□□ 0.91
LINS1Q8NG48 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LINS1Q8NG48 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LINS1Q8NG48 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LINS1Q8NG48 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINS1Q8NG48 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms