Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF3Q8IUI8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF3Q8IUI8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 FAM220CP-201ENST00000395253 831 ntBASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 AC246785.2-201ENST00000432512 513 ntBASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 HLA-J-202ENST00000469281 1241 ntBASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 NSUN5P1-202ENST00000421140 1535 ntBASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 NSUN5P2-203ENST00000457352 1529 ntBASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF3Q8IUI8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 AC026396.1-201ENST00000419388 421 ntBASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 KRT18P31-201ENST00000506277 1292 ntBASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 AL353593.2-201ENST00000602529 1483 ntBASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CRLF3Q8IUI8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms