Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 AL161645.1-201ENST00000622716 1255 ntBASIC17.69■□□□□ 0.42
RNF135Q8IUD6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 AC046185.3-201ENST00000623228 1824 ntBASIC17.69■□□□□ 0.42
RNF135Q8IUD6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 AC080080.1-201ENST00000625121 2420 ntBASIC17.69■□□□□ 0.42
RNF135Q8IUD6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF135Q8IUD6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 MYCLP1-201ENST00000372451 1075 ntBASIC17.68■□□□□ 0.42
RNF135Q8IUD6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 AC084121.4-201ENST00000641598 221 ntBASIC17.68■□□□□ 0.42
RNF135Q8IUD6 AF228730.8-201ENST00000642140 221 ntBASIC17.68■□□□□ 0.42
RNF135Q8IUD6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 AC020916.1-201ENST00000587762 1774 ntBASIC17.68■□□□□ 0.42
RNF135Q8IUD6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF135Q8IUD6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms