Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 AC079140.1-201ENST00000508039 487 ntBASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 AC004835.2-201ENST00000603762 682 ntBASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 AC078925.2-201ENST00000624013 1973 ntBASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 AC004461.1-201ENST00000412461 403 ntBASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 AC243562.1-201ENST00000560672 389 ntBASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 RNF216P1-203ENST00000404404 2427 ntBASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 AC022211.2-201ENST00000585075 2527 ntBASIC16.34■□□□□ 0.21
LRRTM4Q86VH4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LRRTM4Q86VH4 AL512652.2-201ENST00000625156 1716 ntBASIC16.33■□□□□ 0.21
LRRTM4Q86VH4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LRRTM4Q86VH4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LRRTM4Q86VH4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRTM4Q86VH4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRTM4Q86VH4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LRRTM4Q86VH4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRTM4Q86VH4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRTM4Q86VH4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms