Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 CHCHD2P8-201ENST00000429873 447 ntBASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 BNIP3P18-201ENST00000593976 575 ntBASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 AL031731.1-201ENST00000642131 2094 ntBASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM1Q86UE6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 AC233702.3-201ENST00000578656 1387 ntBASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM1Q86UE6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRTM1Q86UE6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms