Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 SAPCD2P3-201ENST00000455031 850 ntBASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 MTDHP3-201ENST00000594186 672 ntBASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 AC008608.2-201ENST00000606089 416 ntBASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 HYMAI-201ENST00000635591 3347 ntBASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDDC2Q7Z4H3 FRMD8P1-201ENST00000440433 1524 ntBASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 TCAF2P1-201ENST00000291129 2421 ntBASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 REXO1L6P-202ENST00000619970 1078 ntBASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.27■□□□□ 0.04
HDDC2Q7Z4H3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HDDC2Q7Z4H3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.26■□□□□ 0.03
HDDC2Q7Z4H3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms