Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LPCAT4Q643R3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 ABHD17AP1-201ENST00000358206 933 ntBASIC15.77■□□□□ 0.12
LPCAT4Q643R3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.77■□□□□ 0.12
LPCAT4Q643R3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.77■□□□□ 0.12
LPCAT4Q643R3 REXO1L8P-201ENST00000604378 1897 ntBASIC15.77■□□□□ 0.11
LPCAT4Q643R3 NFIC-211ENST00000641145 8399 ntBASIC15.77■□□□□ 0.11
LPCAT4Q643R3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LPCAT4Q643R3 AP003680.1-201ENST00000598970 3660 ntBASIC15.76■□□□□ 0.11
LPCAT4Q643R3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 AL049757.1-201ENST00000616842 1596 ntBASIC15.76■□□□□ 0.11
LPCAT4Q643R3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 UBE2SP1-201ENST00000450587 669 ntBASIC15.76■□□□□ 0.11
LPCAT4Q643R3 TSPY20P-201ENST00000450910 630 ntBASIC15.76■□□□□ 0.11
LPCAT4Q643R3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms