Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 IGLL3P-201ENST00000412472 434 ntBASIC14.59□□□□□ -0.07
HIST1H3AP68431 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 RNA5SP415-201ENST00000517246 115 ntBASIC14.59□□□□□ -0.07
HIST1H3AP68431 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 GPAA1P2-202ENST00000606848 1787 ntBASIC14.59□□□□□ -0.07
HIST1H3AP68431 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 MTHFR-217ENST00000641820 1569 ntBASIC14.59□□□□□ -0.07
HIST1H3AP68431 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.58□□□□□ -0.07
HIST1H3AP68431 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST1H3AP68431 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST1H3AP68431 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HIST1H3AP68431 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
HIST1H3AP68431 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
HIST1H3AP68431 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HIST1H3AP68431 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 HCG4B-203ENST00000450128 991 ntBASIC14.58□□□□□ -0.08
HIST1H3AP68431 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.58□□□□□ -0.08
HIST1H3AP68431 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 MIR4751-201ENST00000578027 74 ntBASIC14.58□□□□□ -0.08
HIST1H3AP68431 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H3AP68431 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HIST1H3AP68431 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 HMGA1P7-201ENST00000406908 502 ntBASIC14.57□□□□□ -0.08
HIST1H3AP68431 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms