Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.58□□□□□ -0.08
CLDN12P56749 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN12P56749 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CLDN12P56749 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CLDN12P56749 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN12P56749 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN12P56749 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN12P56749 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN12P56749 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN12P56749 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN12P56749 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 AC148477.5-201ENST00000625164 1645 ntBASIC14.57□□□□□ -0.08
CLDN12P56749 RNF152P1-201ENST00000397754 604 ntBASIC14.57□□□□□ -0.08
CLDN12P56749 AL596275.1-201ENST00000423464 877 ntBASIC14.57□□□□□ -0.08
CLDN12P56749 NUS1P1-201ENST00000446295 882 ntBASIC14.57□□□□□ -0.08
CLDN12P56749 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLDN12P56749 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN12P56749 AC083849.1-201ENST00000615227 514 ntBASIC14.57□□□□□ -0.08
CLDN12P56749 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.57□□□□□ -0.08
CLDN12P56749 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN12P56749 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CLDN12P56749 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN12P56749 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN12P56749 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN12P56749 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLDN12P56749 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLDN12P56749 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CLDN12P56749 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN12P56749 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 AC091607.1-201ENST00000490318 1060 ntBASIC14.56□□□□□ -0.08
CLDN12P56749 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN12P56749 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN12P56749 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN12P56749 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 AC005363.2-201ENST00000618631 242 ntBASIC14.56□□□□□ -0.08
CLDN12P56749 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.56□□□□□ -0.08
CLDN12P56749 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN12P56749 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 AL671710.1-201ENST00000610245 2349 ntBASIC14.56□□□□□ -0.08
CLDN12P56749 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLDN12P56749 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN12P56749 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN12P56749 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN12P56749 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CLDN12P56749 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms