Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AC009154.2-201ENST00000621177 724 ntBASIC15.04■□□□□ -0
SOX6P35712 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.04■□□□□ -0
SOX6P35712 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SOX6P35712 AC073912.3-201ENST00000624414 853 ntBASIC15.04■□□□□ -0
SOX6P35712 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SOX6P35712 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.04■□□□□ -0
SOX6P35712 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX6P35712 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.04■□□□□ -0
SOX6P35712 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX6P35712 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.04■□□□□ -0
SOX6P35712 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SOX6P35712 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX6P35712 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SOX6P35712 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.04■□□□□ -0
SOX6P35712 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.03■□□□□ -0
SOX6P35712 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.03■□□□□ -0
SOX6P35712 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SOX6P35712 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.03■□□□□ -0
SOX6P35712 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 GPR89P-201ENST00000407924 1495 ntBASIC15.03■□□□□ -0
SOX6P35712 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.03■□□□□ -0
SOX6P35712 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.03■□□□□ -0
SOX6P35712 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 SLC25A1P2-201ENST00000430693 912 ntBASIC15.03■□□□□ -0
SOX6P35712 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.03■□□□□ -0
SOX6P35712 TSPY17P-201ENST00000450329 467 ntBASIC15.03■□□□□ -0
SOX6P35712 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.03■□□□□ -0
SOX6P35712 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SOX6P35712 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.03■□□□□ -0
SOX6P35712 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SOX6P35712 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.03■□□□□ -0
SOX6P35712 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.03■□□□□ -0
SOX6P35712 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.03■□□□□ -0
SOX6P35712 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.03■□□□□ -0
SOX6P35712 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SOX6P35712 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.03■□□□□ -0
SOX6P35712 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.03■□□□□ -0
SOX6P35712 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SOX6P35712 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.03■□□□□ -0
SOX6P35712 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SOX6P35712 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SOX6P35712 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
SOX6P35712 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SOX6P35712 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.02■□□□□ -0
SOX6P35712 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.02■□□□□ -0
SOX6P35712 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SOX6P35712 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.02■□□□□ -0
SOX6P35712 SEC1P-202ENST00000473944 940 ntBASIC15.02■□□□□ -0
SOX6P35712 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.02■□□□□ -0
SOX6P35712 AC128688.1-201ENST00000487626 519 ntBASIC15.02■□□□□ -0
SOX6P35712 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SOX6P35712 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.02■□□□□ -0
SOX6P35712 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SOX6P35712 AC116562.4-202ENST00000641738 218 ntBASIC15.02■□□□□ -0
SOX6P35712 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SOX6P35712 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SOX6P35712 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX6P35712 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SOX6P35712 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX6P35712 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SOX6P35712 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.02□□□□□ -0.01
SOX6P35712 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX6P35712 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SOX6P35712 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX6P35712 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SOX6P35712 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SOX6P35712 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX6P35712 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX6P35712 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SOX6P35712 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms