Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AL928711.1-201ENST00000570165 459 ntBASIC20.1■□□□□ 0.81
CHMLP26374 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMLP26374 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMLP26374 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CHMLP26374 AL645728.2-201ENST00000641974 660 ntBASIC20.1■□□□□ 0.81
CHMLP26374 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMLP26374 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CHMLP26374 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CHMLP26374 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMLP26374 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMLP26374 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMLP26374 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CHMLP26374 LINC01144-201ENST00000626198 1710 ntBASIC20.1■□□□□ 0.81
CHMLP26374 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.1■□□□□ 0.81
CHMLP26374 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.1■□□□□ 0.81
CHMLP26374 AC104109.2-201ENST00000602919 1418 ntBASIC20.1■□□□□ 0.81
CHMLP26374 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMLP26374 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.1■□□□□ 0.81
CHMLP26374 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMLP26374 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMLP26374 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CHMLP26374 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMLP26374 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CHMLP26374 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMLP26374 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMLP26374 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CHMLP26374 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMLP26374 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CHMLP26374 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMLP26374 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMLP26374 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMLP26374 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMLP26374 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMLP26374 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMLP26374 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
CHMLP26374 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMLP26374 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMLP26374 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMLP26374 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CHMLP26374 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CHMLP26374 KRT18P2-201ENST00000447938 1258 ntBASIC20.08■□□□□ 0.81
CHMLP26374 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.08■□□□□ 0.81
CHMLP26374 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CHMLP26374 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMLP26374 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.08■□□□□ 0.81
CHMLP26374 AL031055.1-201ENST00000606362 631 ntBASIC20.08■□□□□ 0.81
CHMLP26374 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMLP26374 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMLP26374 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.08■□□□□ 0.8
CHMLP26374 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHMLP26374 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMLP26374 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMLP26374 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMLP26374 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHMLP26374 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMLP26374 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMLP26374 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 IL9RP2-201ENST00000423948 1312 ntBASIC20.07■□□□□ 0.8
CHMLP26374 AL596087.1-201ENST00000400979 1969 ntBASIC20.07■□□□□ 0.8
CHMLP26374 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHMLP26374 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMLP26374 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMLP26374 RPL13AP23-201ENST00000480739 586 ntBASIC20.07■□□□□ 0.8
CHMLP26374 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMLP26374 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMLP26374 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMLP26374 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMLP26374 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMLP26374 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHMLP26374 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMLP26374 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMLP26374 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMLP26374 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMLP26374 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms