Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRM3P20309 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHRM3P20309 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHRM3P20309 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRM3P20309 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRM3P20309 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRM3P20309 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 MRPL3P1-201ENST00000400109 1033 ntBASIC16.66■□□□□ 0.26
CHRM3P20309 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRM3P20309 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 MPDU1-223ENST00000582151 728 ntBASIC16.66■□□□□ 0.26
CHRM3P20309 AL049840.3-201ENST00000602669 611 ntBASIC16.66■□□□□ 0.26
CHRM3P20309 AC013467.2-201ENST00000605472 835 ntBASIC16.66■□□□□ 0.26
CHRM3P20309 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CHRM3P20309 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRM3P20309 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRM3P20309 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHRM3P20309 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.65■□□□□ 0.26
CHRM3P20309 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CHRM3P20309 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.65■□□□□ 0.26
CHRM3P20309 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRM3P20309 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CHRM3P20309 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRM3P20309 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRM3P20309 AP001005.1-201ENST00000571755 1248 ntBASIC16.65■□□□□ 0.26
CHRM3P20309 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 AC117500.6-201ENST00000624871 588 ntBASIC16.65■□□□□ 0.26
CHRM3P20309 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 AC129492.6-201ENST00000611383 1305 ntBASIC16.65■□□□□ 0.26
CHRM3P20309 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRM3P20309 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRM3P20309 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CHRM3P20309 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
CHRM3P20309 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRM3P20309 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CHRM3P20309 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms