Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B1P20020 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ATP2B1P20020 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2B1P20020 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 AC108751.1-201ENST00000490852 363 ntBASIC19.28■□□□□ 0.68
ATP2B1P20020 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2B1P20020 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B1P20020 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2B1P20020 PGM5P2-202ENST00000637225 1043 ntBASIC19.28■□□□□ 0.68
ATP2B1P20020 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2B1P20020 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ATP2B1P20020 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2B1P20020 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B1P20020 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2B1P20020 PCDHB19P-201ENST00000570871 2371 ntBASIC19.27■□□□□ 0.68
ATP2B1P20020 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B1P20020 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B1P20020 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B1P20020 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B1P20020 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
ATP2B1P20020 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B1P20020 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
ATP2B1P20020 PMS2P1-201ENST00000431037 1228 ntBASIC19.27■□□□□ 0.68
ATP2B1P20020 RNA5SP415-201ENST00000517246 115 ntBASIC19.27■□□□□ 0.68
ATP2B1P20020 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP2B1P20020 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2B1P20020 UNC93B6-202ENST00000528242 690 ntBASIC19.27■□□□□ 0.68
ATP2B1P20020 MIR4751-201ENST00000578027 74 ntBASIC19.27■□□□□ 0.68
ATP2B1P20020 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
ATP2B1P20020 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP2B1P20020 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP2B1P20020 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B1P20020 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2B1P20020 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B1P20020 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B1P20020 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B1P20020 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B1P20020 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B1P20020 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2B1P20020 AL671710.1-201ENST00000610245 2349 ntBASIC19.26■□□□□ 0.67
ATP2B1P20020 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ATP2B1P20020 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ATP2B1P20020 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATP2B1P20020 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 MRPL20P1-201ENST00000400819 433 ntBASIC19.26■□□□□ 0.67
ATP2B1P20020 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.26■□□□□ 0.67
ATP2B1P20020 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 AP002490.2-201ENST00000524791 560 ntBASIC19.26■□□□□ 0.67
ATP2B1P20020 AC107918.2-201ENST00000530817 355 ntBASIC19.26■□□□□ 0.67
ATP2B1P20020 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP2B1P20020 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATP2B1P20020 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B1P20020 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B1P20020 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B1P20020 AC006277.1-201ENST00000624348 1610 ntBASIC19.25■□□□□ 0.67
ATP2B1P20020 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B1P20020 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B1P20020 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ATP2B1P20020 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B1P20020 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B1P20020 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ATP2B1P20020 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B1P20020 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B1P20020 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B1P20020 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms