Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN2P17655 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN2P17655 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.27■□□□□ 0.67
CAPN2P17655 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN2P17655 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN2P17655 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CAPN2P17655 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CAPN2P17655 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CAPN2P17655 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.26■□□□□ 0.67
CAPN2P17655 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CAPN2P17655 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CAPN2P17655 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN2P17655 SLC25A6P5-201ENST00000435663 894 ntBASIC19.26■□□□□ 0.67
CAPN2P17655 AC097493.3-201ENST00000509725 367 ntBASIC19.26■□□□□ 0.67
CAPN2P17655 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.26■□□□□ 0.67
CAPN2P17655 AC026150.2-201ENST00000564693 1156 ntBASIC19.26■□□□□ 0.67
CAPN2P17655 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.26■□□□□ 0.67
CAPN2P17655 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 AL390754.1-201ENST00000619088 582 ntBASIC19.26■□□□□ 0.67
CAPN2P17655 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CAPN2P17655 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.26■□□□□ 0.67
CAPN2P17655 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.26■□□□□ 0.67
CAPN2P17655 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN2P17655 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CAPN2P17655 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CAPN2P17655 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN2P17655 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN2P17655 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN2P17655 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN2P17655 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CAPN2P17655 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CAPN2P17655 AC241585.1-201ENST00000433527 519 ntBASIC19.25■□□□□ 0.67
CAPN2P17655 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN2P17655 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.25■□□□□ 0.67
CAPN2P17655 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN2P17655 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN2P17655 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN2P17655 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CAPN2P17655 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN2P17655 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CAPN2P17655 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN2P17655 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN2P17655 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CAPN2P17655 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN2P17655 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN2P17655 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN2P17655 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.24■□□□□ 0.67
CAPN2P17655 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 KRT17P7-201ENST00000451704 1104 ntBASIC19.24■□□□□ 0.67
CAPN2P17655 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN2P17655 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.24■□□□□ 0.67
CAPN2P17655 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN2P17655 LINC01225-203ENST00000563550 1244 ntBASIC19.24■□□□□ 0.67
CAPN2P17655 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN2P17655 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.24■□□□□ 0.67
CAPN2P17655 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN2P17655 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN2P17655 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CAPN2P17655 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN2P17655 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms