Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TPM3P06753 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TPM3P06753 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TPM3P06753 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TPM3P06753 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TPM3P06753 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM3P06753 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.78■□□□□ 0.6
TPM3P06753 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM3P06753 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.78■□□□□ 0.6
TPM3P06753 AC117947.1-201ENST00000427448 529 ntBASIC18.78■□□□□ 0.6
TPM3P06753 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM3P06753 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.78■□□□□ 0.6
TPM3P06753 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.78■□□□□ 0.6
TPM3P06753 AC005363.2-201ENST00000618631 242 ntBASIC18.78■□□□□ 0.6
TPM3P06753 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TPM3P06753 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM3P06753 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM3P06753 AL021920.2-201ENST00000624828 1351 ntBASIC18.78■□□□□ 0.6
TPM3P06753 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.78■□□□□ 0.6
TPM3P06753 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.77■□□□□ 0.6
TPM3P06753 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TPM3P06753 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM3P06753 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TPM3P06753 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM3P06753 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.77■□□□□ 0.6
TPM3P06753 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.77■□□□□ 0.6
TPM3P06753 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.77■□□□□ 0.6
TPM3P06753 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TPM3P06753 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM3P06753 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TPM3P06753 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TPM3P06753 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
TPM3P06753 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM3P06753 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 AC092647.4-201ENST00000457211 535 ntBASIC18.77■□□□□ 0.6
TPM3P06753 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 RN7SL606P-201ENST00000472779 293 ntBASIC18.77■□□□□ 0.6
TPM3P06753 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.77■□□□□ 0.6
TPM3P06753 AL592071.1-201ENST00000611956 408 ntBASIC18.77■□□□□ 0.6
TPM3P06753 AC124864.1-201ENST00000623408 392 ntBASIC18.77■□□□□ 0.6
TPM3P06753 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TPM3P06753 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM3P06753 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM3P06753 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM3P06753 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TPM3P06753 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TPM3P06753 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM3P06753 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM3P06753 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM3P06753 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms