Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.68■□□□□ 0.58
GGPS1O95749 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.68■□□□□ 0.58
GGPS1O95749 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GGPS1O95749 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.68■□□□□ 0.58
GGPS1O95749 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.68■□□□□ 0.58
GGPS1O95749 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.67■□□□□ 0.58
GGPS1O95749 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GGPS1O95749 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GGPS1O95749 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.67■□□□□ 0.58
GGPS1O95749 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
GGPS1O95749 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.67■□□□□ 0.58
GGPS1O95749 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
GGPS1O95749 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GGPS1O95749 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.67■□□□□ 0.58
GGPS1O95749 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 AC073389.1-201ENST00000595595 795 ntBASIC18.67■□□□□ 0.58
GGPS1O95749 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.67■□□□□ 0.58
GGPS1O95749 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
GGPS1O95749 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GGPS1O95749 SNX33P1-201ENST00000592116 1762 ntBASIC18.67■□□□□ 0.58
GGPS1O95749 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
GGPS1O95749 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.67■□□□□ 0.58
GGPS1O95749 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
GGPS1O95749 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.67■□□□□ 0.58
GGPS1O95749 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.67■□□□□ 0.58
GGPS1O95749 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GGPS1O95749 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.66■□□□□ 0.58
GGPS1O95749 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GGPS1O95749 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.66■□□□□ 0.58
GGPS1O95749 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.66■□□□□ 0.58
GGPS1O95749 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.66■□□□□ 0.58
GGPS1O95749 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 PRYP6-201ENST00000514804 343 ntBASIC18.66■□□□□ 0.58
GGPS1O95749 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 MIR4453-201ENST00000584019 89 ntBASIC18.66■□□□□ 0.58
GGPS1O95749 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GGPS1O95749 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.66■□□□□ 0.58
GGPS1O95749 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
GGPS1O95749 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GGPS1O95749 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
GGPS1O95749 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.65■□□□□ 0.58
GGPS1O95749 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.65■□□□□ 0.58
GGPS1O95749 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms