Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC7O00311 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.4■□□□□ 0.22
CDC7O00311 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC7O00311 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.4■□□□□ 0.22
CDC7O00311 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDC7O00311 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.4■□□□□ 0.22
CDC7O00311 MRPL3P1-201ENST00000400109 1033 ntBASIC16.4■□□□□ 0.22
CDC7O00311 MRPL20P1-201ENST00000400819 433 ntBASIC16.4■□□□□ 0.22
CDC7O00311 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.4■□□□□ 0.22
CDC7O00311 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.4■□□□□ 0.22
CDC7O00311 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 KRT126P-201ENST00000549467 1181 ntBASIC16.4■□□□□ 0.22
CDC7O00311 AL160237.2-201ENST00000556165 472 ntBASIC16.4■□□□□ 0.22
CDC7O00311 AC087641.1-201ENST00000557561 1021 ntBASIC16.4■□□□□ 0.22
CDC7O00311 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC7O00311 AC005412.3-201ENST00000580309 715 ntBASIC16.4■□□□□ 0.22
CDC7O00311 AL773604.1-201ENST00000617417 272 ntBASIC16.4■□□□□ 0.22
CDC7O00311 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CDC7O00311 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDC7O00311 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDC7O00311 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC7O00311 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDC7O00311 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CDC7O00311 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.39■□□□□ 0.21
CDC7O00311 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC7O00311 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDC7O00311 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC7O00311 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 AL031284.1-201ENST00000419297 478 ntBASIC16.39■□□□□ 0.21
CDC7O00311 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.39■□□□□ 0.21
CDC7O00311 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.39■□□□□ 0.21
CDC7O00311 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC7O00311 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.39■□□□□ 0.21
CDC7O00311 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC7O00311 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC7O00311 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC7O00311 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDC7O00311 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDC7O00311 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CDC7O00311 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CDC7O00311 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC7O00311 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.38■□□□□ 0.21
CDC7O00311 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC7O00311 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDC7O00311 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDC7O00311 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 PCDHA1-201ENST00000378133 2726 ntBASIC16.38■□□□□ 0.21
CDC7O00311 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC7O00311 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.38■□□□□ 0.21
CDC7O00311 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.38■□□□□ 0.21
CDC7O00311 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CDC7O00311 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.38■□□□□ 0.21
CDC7O00311 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.38■□□□□ 0.21
CDC7O00311 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.38■□□□□ 0.21
CDC7O00311 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC7O00311 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms