Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
CFAP99D6REC4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP99D6REC4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.71■□□□□ 0.27
CFAP99D6REC4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP99D6REC4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP99D6REC4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.71■□□□□ 0.26
CFAP99D6REC4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CFAP99D6REC4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CFAP99D6REC4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 AC068418.2-201ENST00000577309 3703 ntBASIC16.7■□□□□ 0.26
CFAP99D6REC4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CFAP99D6REC4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.7■□□□□ 0.26
CFAP99D6REC4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 FAM185BP-201ENST00000443595 716 ntBASIC16.7■□□□□ 0.26
CFAP99D6REC4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.7■□□□□ 0.26
CFAP99D6REC4 SLC25A1P1-201ENST00000528351 927 ntBASIC16.7■□□□□ 0.26
CFAP99D6REC4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.7■□□□□ 0.26
CFAP99D6REC4 AC027601.4-201ENST00000611259 610 ntBASIC16.7■□□□□ 0.26
CFAP99D6REC4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.7■□□□□ 0.26
CFAP99D6REC4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CFAP99D6REC4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP99D6REC4 LINC00895-201ENST00000629028 1637 ntBASIC16.7■□□□□ 0.26
CFAP99D6REC4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.7■□□□□ 0.26
CFAP99D6REC4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.7■□□□□ 0.26
CFAP99D6REC4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.69■□□□□ 0.26
CFAP99D6REC4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 AL022342.1-201ENST00000400363 863 ntBASIC16.69■□□□□ 0.26
CFAP99D6REC4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 HCG4B-203ENST00000450128 991 ntBASIC16.69■□□□□ 0.26
CFAP99D6REC4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 AC098799.1-201ENST00000504752 800 ntBASIC16.69■□□□□ 0.26
CFAP99D6REC4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 RNA5SP416-201ENST00000516838 111 ntBASIC16.69■□□□□ 0.26
CFAP99D6REC4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 AC064836.3-201ENST00000607928 673 ntBASIC16.69■□□□□ 0.26
CFAP99D6REC4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.69■□□□□ 0.26
CFAP99D6REC4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFAP99D6REC4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms