Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00473A8K010 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
LINC00473A8K010 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00473A8K010 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00473A8K010 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00473A8K010 SAPCD2P3-201ENST00000455031 850 ntBASIC13.61□□□□□ -0.23
LINC00473A8K010 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00473A8K010 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00473A8K010 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00473A8K010 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.61□□□□□ -0.23
LINC00473A8K010 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 AL596087.1-201ENST00000400979 1969 ntBASIC13.61□□□□□ -0.23
LINC00473A8K010 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00473A8K010 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC00473A8K010 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00473A8K010 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00473A8K010 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00473A8K010 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00473A8K010 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00473A8K010 AL365203.3-201ENST00000609742 2057 ntBASIC13.6□□□□□ -0.23
LINC00473A8K010 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00473A8K010 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00473A8K010 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LINC00473A8K010 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00473A8K010 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 LAGE3P1-201ENST00000425356 484 ntBASIC13.6□□□□□ -0.23
LINC00473A8K010 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
LINC00473A8K010 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00473A8K010 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 AC107918.2-201ENST00000530817 355 ntBASIC13.6□□□□□ -0.23
LINC00473A8K010 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00473A8K010 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00473A8K010 AC006557.2-201ENST00000592985 1240 ntBASIC13.6□□□□□ -0.23
LINC00473A8K010 CYP2A7P1-201ENST00000595391 815 ntBASIC13.6□□□□□ -0.23
LINC00473A8K010 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
LINC00473A8K010 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00473A8K010 AC107918.4-202ENST00000641623 219 ntBASIC13.6□□□□□ -0.23
LINC00473A8K010 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00473A8K010 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00473A8K010 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00473A8K010 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00473A8K010 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00473A8K010 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00473A8K010 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms