Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PTCHD3P3-201ENST00000403073 906 ntBASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PRSS29P-201ENST00000440800 595 ntBASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL805961.1-202ENST00000641562 540 ntBASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC079781.4-201ENST00000641908 219 ntBASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TCRBV4S1A1TA0A5B7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RPS8P6-201ENST00000426177 609 ntBASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC004832.2-201ENST00000426397 482 ntBASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GPX1P2-201ENST00000429271 606 ntBASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC112482.1-201ENST00000492080 688 ntBASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AP002490.2-201ENST00000524791 560 ntBASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL353135.1-201ENST00000606729 504 ntBASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms